PGMax: Factor Graphs for Discrete Probabilistic Graphical Models and Loopy Belief Propagation in JAX

Guangyao Zhou^‡, Nishanth Kumar^‡, Antoine Dedieu, Miguel Lázaro-Gredilla, Shrinu Kushagra, Dileep George

arXiv:2202.04110, 2022

Metropolis Augmented Hamiltonian Monte Carlo

Guangyao Zhou

Symposium on Advances in Approximate Bayesian Inference (AABI) 2022

Graphical Models with Attention for Context-Specific Independence and an Application to Perceptual Grouping

Guangyao Zhou, Wolfgang Lehrach, Antoine Dedieu, Miguel Lázaro-Gredilla, Dileep George

arXiv:2112.03371, 2021

Query Training: Learning a Worse Model to Infer Better Marginals in Undirected Graphical Models with Hidden Variables

Miguel Lázaro-Gredilla, Wolfgang Lehrach, Nishad Gothoskar, Guangyao Zhou,
Antoine Dedieu, Dileep George

AAAI Conference on Artificial Ingelligence (AAAI) 2021

Mixed Hamiltonian Monte Carlo for mixed discrete and continuous variables

Guangyao Zhou

Advances in Neural Information Processing Systems (NeurIPS) 2020
Extended abstract accepted as talk at PROBPROG 2020

A detailed mathematical theory of thalamic and cortical microcircuits based on inference
in a generative vision model

Dileep George, Miguel Lázaro-Gredilla, Wolfgang Lehrach, Antoine Dedieu, Guangyao Zhou

bioRxiv 2020.09.09.290601, 2020

Capacities and efficient computation of first passage probabilities

Jackson Loper^‡, Guangyao Zhou^‡, Stuart Geman

Phys. Rev. E 102, 023304, 2020

Base-pair ambiguity and the kinetics of RNA folding

Guangyao Zhou, Jackson Loper, Stuart Geman

BMC Bioinformatics, 20(1):666, 2019

Sparse feature selection by information theory

Guangyao Zhou, Stuart Geman, Joachim M Buhmann

IEEE International Symposium on Information Theory (ISIT), 2014

L1-graph construction using structured sparsity

Guangyao Zhou, Zhiwu Lu, Yuxin Peng

Neurocomputing, 120:441-452, 2013